SubtiBank SubtiBank
Version comparison:

2017-12-15 18:33:122025-05-13 05:49:19

locus

BSU13670

BSU_13670

geneLength

435

438

outlinks

bsu

BSU13670

BSU_13670

Gene

Coordinates

1,433,199 → 1,433,636

1,433,199 1,433,636

The protein

Additional information

'''Binding site:''' tATCTcgaAtTCgAGATaaaa [Pubmed|17725564]

information on binding sites can be found in the [http://www.prodoric2.de/detail.php?acc=MX000225 PRODORIC2 database]

Binding site: tATCTcgaAtTCgAGATaaaa [Pubmed|17725564]

information on binding sites can be found in the [http://www.prodoric2.de/detail.php?acc=MX000225 PRODORIC2 database]

Biological materials

Mutant

BKE13670 (Δ[[gene|mhqR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTCAATCATCCTTTT, downstream forward: _UP4_TAAAAAAAGGAAGCCTGATA

BKK13670 (Δ[[gene|mhqR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTCAATCATCCTTTT, downstream forward: _UP4_TAAAAAAAGGAAGCCTGATA

BKE13670 ([[gene|mhqR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTCAATCATCCTTTT, downstream forward: _UP4_TAAAAAAAGGAAGCCTGATA

BKK13670 ([[gene|mhqR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTCAATCATCCTTTT, downstream forward: _UP4_TAAAAAAAGGAAGCCTGATA

Labs working on this gene/protein

[SW|Haike Antelmann],Free University of Berlin, Germany

References

18282125, 26051891, 17725564, 22383849, 27965289

18282125, 26051891, 17725564, 22383849, 27965289, 19509310

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|HTH marR-type domain] (aa 5-137) (according to UniProt)

The protein

Structure

[PDB|3GFJ] (from Sulfolobus tokodaii, 26% identity) [pubmed|19509310]

labs

[SW|Haike Antelmann],Free University of Berlin, Germany